CDS

Accession Number TCMCG051C12471
gbkey CDS
Protein Id XP_024452288.1
Location complement(join(21346995..21348560,21348760..21348894,21349122..21349175,21349332..21349409,21350024..21350106,21350191..21350230,21350345..21350470,21350802..21351062))
Gene LOC7461374
GeneID 7461374
Organism Populus trichocarpa

Protein

Length 780aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024596520.1
Definition splicing factor 1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category A
Description K homology RNA-binding domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13095        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGACTGCAACAAGTGCTTCATCCAGTGCATCGACAACTAGCGGTCCAAAGGTTTCTTTATTTGCTGCCAAGTCAGGGTTTGTTATCCCAAAAAACAAACTTTCAGGTTCATTGGTTCCTATCTTCAAAGGAGGTAAAAAACCAGGTAGTAATGATGCTGTGAATGGAGAAAGTACCAATCAGGTCCAGAGGAAAACGAAATGGGGTCCTGATTTAACACAAGATGCTGATGTTAGAAGGGGGAGAGCCTTGGCTTACCAGACTCGAGTGGATCAAATTGTGCAACAGCTGAAATCAGAAATTTCAGAACCTGGGGGAGATAGAGACTCACATGAACCCAATGAGCTTGAAGATCTCAAATCTTTAAGTCCACTAATCCACAATAAGAACTCTGAACTTTTGGAACTTGAAAAACAGGAAGCTATAGGTGAGATACTTAAGTTGAATCCAACCTACAAGGTACCACCTGACTATAAGCCTTTGCTAAAAGAGACCACAGTTCCTATCCCTGTCAAGGAATATCCTGGATATAATTTTATTGGTCTAATATTTGGGCATGGAAGCGAGACTCAGAGGCGATTAGAAAAGGAAACTGGAGCCAAAATACTAGTACATGGTACCACAGCACATACTGGAGAGAAGGTTGAAATTTCTTCATCTGATGGCACTGAAACCCAGGTTGTGTATGAAGAGTTGAGTGTTCTTGTAACAGCGGACACATTTGAGAAAGTTGATGCAGCTGTTGTCCTGATTGAATTGCTACTCGCCTCAGTATCAGGAAATTTAGCAGATAATGCAAATGTTAGCCAAAACCAGGAGGCCTCTACTCCTTTCATGGTCTCTACCCTTGTAAACCAGGGAGTTTTTCCACCTGTAACTCCTCAACAAGGTCAGTTCCAATATCAAAATTCATGGTTCCCTGCTGCCACACCTCAAGCTCATGTACACCAGCCTTCAGGCTTAATTTCCCCCCAGACTTCTTCAGCACCAATTTTAAACAATCCTGTACATGTACAGTCATCATCTTTCAATTCTCCAACCATGCCTTCTTTATTTGGGCCTCGGCCAGTGCAGGCCTTTTCAAATCCATATCTACCTAGAAACTTTCCCATGCCAGCTCCACAGCCTCAATTTACTGGTAGCCTGCCCCAACCAATAGGGTCGTCCTCTGTTGCAAGGCCATTATTACTTCAACCCCTGTCAAGCGGTCCAACAGGACCACCACCTGACAGGCCATTAGGTCCTTCGGGGTTCTCTTCTGGGTGGCCTGGAGCTCCTTCAAGTGTTCCAGCATCTTTAGGTTTAGGCAACATGGGACAAACAACTCCTCCTATGGTTCCTCCACCTGGTCCTAGGCATGCTGTACCACAGCTAGGTTTTCCATCCCCTGCAGCACCTCCAAATGCAGCTTCTATGAACCGTCCTACCACAGCCCCAACTTTTACTTCTGTTCCACGACCTCAAGTGGGACCTTCCTCTGCTCCTACCCCAATCCAATCTTCACTTGGTACGCCATTGCCTAATTCATCAATAACTCCGGTATTTGGTTCTGCACCAATTTCATCACCTATGATGCCTGCATCACAGGCAACTCTGCAGACAGGAGTTGTAGGAGCTTTTCCTGTAACTACCTCAAATTTTGCTCCCATAAGATCACCCACAATAACAAATGCAAAGGTGCAGCATTCAGGTACTGGTGATTTTACTTGCCGACCTCATCACCAGCAGAATCCAGCTCCTCAAATTGTTCCCAGCTTTAGCAGTCATCACGCTACTCAGAATGGCCCCCTTCATAGACCCATGATGCAAACAATAACACCTCAAGCACCACCTTTCCACATGGATGTCCCTAACTCAACCACTCAACCTGGCAGGCATCTGTTTCCTAGACCACAGGTTGGCAACCAATTGGGTCAAGTTCCCTTTGTTGGAAATCCTACCGGTCACTCGCATCACCCCAGACTTCCAGCATTTTCAAATGCAAGTCCAGTGGGACCACCGGTCATACAGATGGGATCCCGGAACTTTAGCTCAACTCCCCACCTACCCAATTTAACAGGTCCTTTACCTCCCAGACCAGGAAACCCCATGCAACTTCAGCAAAATTATCCAGCTCCAAGAGCTCCTCGAGGACAATCAATTGCTCTGAATCAGCAGCCTTTCATCTCCTCGGCATCTGCTAGACCAGCTTCATTCCAGGGAGGGCAGCAGGTTTATGATCCATTTTCTCCCACTTCTGTTTCAGCTGCGTCTCAACAGCAAGTAGGTAATCTAGGAAAGGGGAGAAAGCCAGAGAACGATCCCGAGTATGAAGATTTGATGGCCTCGGTTGGAGTAAAATAA
Protein:  
MTATSASSSASTTSGPKVSLFAAKSGFVIPKNKLSGSLVPIFKGGKKPGSNDAVNGESTNQVQRKTKWGPDLTQDADVRRGRALAYQTRVDQIVQQLKSEISEPGGDRDSHEPNELEDLKSLSPLIHNKNSELLELEKQEAIGEILKLNPTYKVPPDYKPLLKETTVPIPVKEYPGYNFIGLIFGHGSETQRRLEKETGAKILVHGTTAHTGEKVEISSSDGTETQVVYEELSVLVTADTFEKVDAAVVLIELLLASVSGNLADNANVSQNQEASTPFMVSTLVNQGVFPPVTPQQGQFQYQNSWFPAATPQAHVHQPSGLISPQTSSAPILNNPVHVQSSSFNSPTMPSLFGPRPVQAFSNPYLPRNFPMPAPQPQFTGSLPQPIGSSSVARPLLLQPLSSGPTGPPPDRPLGPSGFSSGWPGAPSSVPASLGLGNMGQTTPPMVPPPGPRHAVPQLGFPSPAAPPNAASMNRPTTAPTFTSVPRPQVGPSSAPTPIQSSLGTPLPNSSITPVFGSAPISSPMMPASQATLQTGVVGAFPVTTSNFAPIRSPTITNAKVQHSGTGDFTCRPHHQQNPAPQIVPSFSSHHATQNGPLHRPMMQTITPQAPPFHMDVPNSTTQPGRHLFPRPQVGNQLGQVPFVGNPTGHSHHPRLPAFSNASPVGPPVIQMGSRNFSSTPHLPNLTGPLPPRPGNPMQLQQNYPAPRAPRGQSIALNQQPFISSASARPASFQGGQQVYDPFSPTSVSAASQQQVGNLGKGRKPENDPEYEDLMASVGVK